iSeqQC: a tool for expression-based quality control in RNA sequencing

BMC Bioinformatics

Table 2 Features and capabilities of iSeqQC compared with other tools

Metrics	iSeqQC	QoRTs	QC3	RSeqQC	RNA-SeQC	EDASeq	NOISeq
Summary expression	Yes	No	No	No	No	Yes	No
Dimensional reduction	Yes	No	No	No	No	No	Yes
Correlations	Yes	Yes	Yes	Yes	Yes	No	No
Housekeeping genes expression	Yes	No	No	No	No	No	No
Generate Plots	Yes	Yes	No	No	No	No	No

ISSN: 1471-2105