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Fig. 1 | BMC Bioinformatics

Fig. 1

From: Investigation of sequence features of hinge-bending regions in proteins with domain movements using kernel logistic regression

Fig. 1

DynDom result for glutamine binding protein. DynDom result for the movement that occurs upon binding glutamine (PDB: 1GGG, chain A to PDB: 1WDN, chain A) showing the open, ligand-free conformation (see DynDom website at www.cmp.uea.ac.uk/dyndom for more details on this and other domain movements). The arrow represents the hinge axis. Red and blue are the dynamic domains, green the hinge-bending regions. Red and blue amino acids in the sequence at the bottom of the figure are intradomain and green amino acids are hinge-bending. Such annotated sequences are the basic data of this study. This is a typical member of Group 1 (see Methods)

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BMC Bioinformatics

ISSN: 1471-2105

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