Fig. 4
From: Short paired-end reads trump long single-end reads for expression analysis
Histograms of differences in root-mean-square error (RMSE) between 2 × 40 and either 1 × 75 or 1 × 125, where RMSE is calculated using 2 × 125 as the gold standard. RMSE differences for kallisto for (a) transcripts and (b) genes, and RSEM for (c) transcripts and (d) genes. The vertical black dashed line indicates the threshold above which RMSE for either 1 × 75 or 1 × 125 is greater than that for 2 × 40