Skip to main content

Table 1 The data sources used in miRTIssue ce and their data types

From: miRTissue ce: extending miRTissue web service with the analysis of ceRNA-ceRNA interactions

Data source Data type Url Ref.
miRSponge experimental validated ceRNA interactions http://bio-bigdata.hrbmu.edu.cn/miRSponge/ [30]
LNCACTdb 2.0 experimental validated lncRNA-associated ceRNA interactions http://www.bio-bigdata.net/LncACTdb/index.html [34]
miRCode Predicted miRNA-target interaction including lncRNA and pseudogene http://www.mircode.org/index.php [29]
miRTarBase experimental validated miRNA-target interactions http://mirtarbase.mbc.nctu.edu.tw/php/index.php [64]
TCGA Expression profiles of coding and non-coding RNA of different tissue types https://www.cancer.gov/tcga [65]