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Table 5 Parameters used for generating embedding for each GCN evaluated

From: Juxtapose: a gene-embedding approach for comparing co-expression networks

  Synthetic Networks Heart and Brain Networks Prefrontal Cortex Networks
walk_per_node 1000 1000 1000
walk_length 20 50 30
n_iter 1 1 1
n_workers 20 20 10
embd_dim 30 150 150
window 2 2 2
min_count 2 2 2
negatives 5 15 50
alpha 0.0025 0.0025 0.0025
min_alpha 0.001 0.001 0.001
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