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Table 2 Benchmarking of genomic coverage tasks using simulated reads (ICTV)

From: A multi-task CNN learning model for taxonomic assignment of human viruses

Datasets

Simulated reads (50 bp, n = 1million) from ICTV human viral genomes

Simulated reads (150 bp, n = 100 k) from ICTV human viral genomes

Metrics

Kappa

F1

Kappa

F1

Bowtie 2

0.9442

0.9498

0.9646

0.9646

MT-CNN

0.9336

0.9403

0.9405

0.9465