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Table 4 A taxonomic report of the MT-CNN/Bayesian pipeline

From: A multi-task CNN learning model for taxonomic assignment of human viruses

Identified species

Percentage of assingned hits

Number of covered regions

RanK based on percentage

RanK based on Bayesian scores

SARS

0.5969

10

1

1

MERS

0.0854

9

2

2

variola virus

0.0624

9

3

2

Cercopithecine alphaherpes virus 9

0.0560

9

4

2

Cercopithecine betaherpes virus 5

0.0536

9

5

2

Monkeypox virus

0.0532

7

6

7

Human alphaherpes virus 3

0.0507

8

7

6

Human alphaherpes virus 6A

0.0209

4

8

8

Human mastadenovius G

0.0125

1

9

17

Human gammaherpesvirus 8

0.0125

2

9

11

  1. The table shows the output from the pipeline using the SARS-CoV-2 dataset 4. The initial ranking was done based only of the percentage of assigned hits and the Bayesian ranking incorporated information about the genomic coverage
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BMC Bioinformatics

ISSN: 1471-2105

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