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Fig. 2 | BMC Bioinformatics

Fig. 2

From: MOCCA: a flexible suite for modelling DNA sequence motif occurrence combinatorics

Fig. 2

RF-MOCCA predicts more PcG-enriched candidate PREs and boundary element factor enriched candidate BEs. The numbers of candidate PREs and BEs predicted genome-wide by different models. Predictions in accessible chromatin are broken down into “strongly evidenced” (PRE predictions that overlap with PREs from [26] and BE predictions that overlap with TAD boundaries from [22]), “evidenced” (PRE predictions that overlap with modENCODE signals [27] of Pc, Psc or dSFMBT and BE predictions that overlap with modENCODE signals [27] of BEAF-32 or CP190) and “accessible” (the remainder)

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