From: SSBER: removing batch effect for single-cell RNA sequencing data
 | Seurat | Harmony | SSBER | LIGER |
---|---|---|---|---|
iLISI | 1.458856 | 1.562768 | 1.578711 | 1.58021 |
cLISI | 1.074385 | 1.065975 | 1.048792 | 1.0723 |
ARI | 0.5720612 | 0.6247241 | 0.696191 | 0.61782 |
ASW_batch | 0.064 | 0.096 | 0.056 | 0.089 |
ASW_celltype | 0.348 | 0.329 | 0.387 | 0.319 |
Isolated label | 0.501 | 0.583 | 0.606 | 0.469 |
Cell cycle | 0.674 | 0.761 | 0.733 | 0.612 |
HVG | 0.729 | Â | 0.815 | Â |