From: SSBER: removing batch effect for single-cell RNA sequencing data
 | Seurat | Harmony | SSBER | LIGER |
---|---|---|---|---|
iLISI | 1.369536 | 1.48654 | 1.56786 | 1.46342 |
cLISI | 1.005186 | 1.0045738 | 1.000456 | 1.00428 |
ARI | 0.7753852 | 0.885436 | 0.993591 | 0.86463 |
ASW_batch | 0.167 | 0.146 | 0.086 | 0.186 |
ASW_celltype | 0.447 | 0.668 | 0.783 | 0.658 |
Isolated label | 0.729 | 0.858 | 0.925 | 0.837 |
Cell cycle | 0.618 | 0.707 | 0.662 | 0.609 |
HVG | 0.726 | Â | 0.784 | Â |