From: Predicting Ca2+ and Mg2+ ligand binding sites by deep neural network algorithm
Ligand
hyper-parameter tuning
Hidden layers
Hidden neurons
Batch size
Sn (%)
Sp (%)
Acc (%)
MCC
Ca2+
DNN (optimized)
3
32
26.4
98.6
97.4
0.231
IonSeq [4]
–
22.7
99
98.2
0.211
Mg2+
5
64
16
32.8
98.3
97.6
0.229
5.6
99.9
99.5
0.183
