From: HELLO: improved neural network architectures and methodologies for small variant calling
 | GATK | DeepVariant | HELLO | ||||||
---|---|---|---|---|---|---|---|---|---|
Precision | Recall | Errors | Precision | Recall | Errors | Precision | Recall | Errors | |
15x | 0.993747 | 0.991098 | 46,067 | 0.995494 | 0.994095 | 31,673 | 0.995558 | 0.994285 | 30,905 |
30x | 0.994958 | 0.998203 | 20,865 | 0.997091 | 0.999462 | 10,520 | 0.996894 | 0.999524 | 10,934 |