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Table 1 Number of DEGs identified under three model settings with three types of test statistics

From: A Markov random field model for network-based differential expression analysis of single-cell RNA-seq data

Input statistics Models # DEGsa # Cell-type Specific DEGsb
t-test Main 1472 3607
Main w/ BioGrid 1605 4880
Main w/ IntAct 1601 4875
MAST MAST 1721 4826
MAST w/ BioGrid 1870 8835
MAST w/ IntAct 1867 8809
Wilcoxon Wilcoxon 1562 3945
Wilcoxon w/ BioGrid 1767 6526
Wilcoxon w/ IntAct 1759 6474
  1. aNumber of genes that were found DE in at least one cell type
  2. bAggregated number of cell-type specific DEGs