Table 2 AUPR results for interaction prediction under validation setting CVS1
Method | Datasets | |||
|---|---|---|---|---|
E | IC | GPCR | NR | |
MGRNNM [11] | 0.9660 (0.0006) | 0.9585 (0.0013) | 0.8515 (0.0033) | 0.8791 (0.0019) |
SMGRNNM [11] | 0.9014 (0.0018) | 0.9298 (0.0026) | 0.7483 (0.0039) | 0.6408 (0.0234) |
MC[78] | 0.7882 (0.0022) | 0.8868 (0.0028) | 0.6481 (0.0116) | 0.3950 (0.0298) |
MCG[79] | 0.7621 (0.0025) | 0.8346 (0.0025) | 0.5956 (0.0102) | 0.4558 (0.0202) |
WGRMF [20] | 0.8768 (0.0020) | 0.9225 (0.0022) | 0.7370 (0.0024) | 0.6016 (0.0378) |
WKNKN + L1,2-GRMF [77] | – | – | – | – |
RLS-WNN[25] | 0.8093 (0.0045) | 0.8459 (0.0106) | 0.6933 (0.0226) | 0.7072 (0.0290) |
CMF [35] | 0.8837 (0.0026) | 0.9373 (0.0019) | 0.7543 (0.0017) | 0.6383 (0.0149) |
NRLMF [36] | 0.892 (0.006) | 0.906 (0.008) | 0.749 (0.015) | 0.728 (0.041) |
TMF [28] | 0.952 (0.002) | 0.952 (0.002) | 0.844 (0.006) | 0.811 (0.035) |
DDR [80] | 0.92 | 0.92 | 0.79 | 0.83 |
Proposed method | 0.9687 (0.0007) | 0.9670 (0.0005) | 0.9159 (0.0036) | 0.9253 (0.0091) |