Fig. 4

Asc-Seurat provides options for visualization of gene expression profiles within the inferred trajectories. For each trajectory, three visualization plots are generated, facilitating its interpretation (A). Users can also visualize the expression profile of any gene of interest within the trajectories (B) or as a heatmap (C). In A and B, arrows indicate the direction of the trajectory. In C, at the bottom of the heatmap, the dashed lines connect the clusters (shown inside squares) according to different branches of the inferred trajectory