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Table 7 EvalDNA runtimes on mammalian full and chromosomal assemblies

From: EvalDNA: a machine learning-based tool for the comprehensive evaluation of mammalian genome assembly quality

Assembly

Time

Number of processors

Assembly length (Mbp)

Number of reads (millions)

CH PICR

1 day 11 h

16

2,368.91

179.59

CH PICR Chr8

11 h. 59 min

16

96.66

179.59

CH PICR Chr10

8 h. 13 min

16

32.58

179.59

CH PICR Chr4

16 h. 35 min

16

231.54

179.59

UpperBound Human (from QUAST-LG)

9 days 10 h

24

2,916.50

159.69

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BMC Bioinformatics

ISSN: 1471-2105

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