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Table 7 Include multiple abstracts filter: human evaluation on randomly sampled subset selected after thresholding on average confidence and standard deviation, with the additional condition that these predictions are present in multiple abstracts

From: Large-scale protein-protein post-translational modification extraction with distant supervision and confidence calibrated BioBERT

 

Methyl.

Phosphoryl.

Total

Correct

4

16

20

Incorrect—NER

0

2

2

Incorrect—Not related to PPI

0

1

1

Incorrect—relationship not described

0

7

7

Not—sure

0

4

4

Total

4

30

34

  1. We select 30 interactions per PTM, unless there are fewer predictions