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Table 1 Comparison of STRIDE to PFAM and TIGRFAM, using the same parameter values

From: STRIDE: a command-line HMM-based identifier and sub-classifier of Plasmodium falciparum RIFIN and STEVOR variant surface antigen families

Dataset STRIDE PFAM TIGRFAM
  RIFIN RIFIN-A RIFIN-B RIFIN Likely RIFIN # FHEYDER STEVOR RIFIN STEVOR RIFIN STEVOR
P. falciparum 3D7
(185 rif + 43 stevor = 228)
220 182 122 52 4 4 36 38 216 178 38 215 177 38
P. reichenowi
(463 rif + 66 stevor = 529)
514 452 250 158 24 20 59 62 477 416 61 498 436 62
Validation Dataset (3888 sequences) 3540 2844 1409 741 318 376 605 696 2707 2014 693 3394 2694 700
P. vivax, P. berghei, P. chabaudi 0 0 0 0 0 0 0 0 0 0 0 0 0
  1. ∑ represents the total number of sequences. All three tools had 100% specificity