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Table 7 Results of Lerna evaluated on Nanopore simulated reads corrected using Canu

From: Lerna: transformer architectures for configuring error correction tools for short- and long-read genome sequencing

k

Mapped reads

11

9531

13

9549

15

9631

17

9723

19

9813

21

9724

23

9696

25

9657

27

9553

29

9545

  1. We use a word length of 4 (\(w=4\)) and find that the best value of the MhapMerSize comes out to be 19
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BMC Bioinformatics

ISSN: 1471-2105

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