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Table 7 Results of Lerna evaluated on Nanopore simulated reads corrected using Canu

From: Lerna: transformer architectures for configuring error correction tools for short- and long-read genome sequencing

k Mapped reads
11 9531
13 9549
15 9631
17 9723
19 9813
21 9724
23 9696
25 9657
27 9553
29 9545
  1. We use a word length of 4 (\(w=4\)) and find that the best value of the MhapMerSize comes out to be 19