Table 6 Top 15 predicted lncRNAs associated with gastric cancer
From: gGATLDA: lncRNA-disease association prediction based on graph-level graph attention network
Disease similarity based on gene–gene interaction network | Disease similarity based on disease semantic | ||||
|---|---|---|---|---|---|
Rank | lncRNA | Evidence | Rank | lncRNA | Evidence |
1 | KCNQ1OT1 | Lnc2Cancer 3.0 | 1 | TRAF3IP2-AS1 | PMID: 25370763 |
2 | SOX2-OT | Lnc2Cancer 3.0 | 2 | SOX2-OT | Lnc2Cancer 3.0 |
3 | LincRNA-p21 | Lnc2Cancer 3.0 | 3 | DLX6-AS1 | Lnc2Cancer 3.0 |
4 | XIST | LncRNADisease v2.0 | 4 | NEAT1 | Lnc2Cancer 3.0 |
5 | NPTN-IT1 | Lnc2Cancer 3.0 | 5 | MALAT1 | Lnc2Cancer 3.0 |
6 | MIAT | Lnc2Cancer 3.0 | 6 | GAS5 | Lnc2Cancer 3.0 |
7 | DRAIC | Lnc2Cancer 3.0 | 7 | XIST | LncRNADisease v2.0 |
8 | MALAT1 | Lnc2Cancer 3.0 | 8 | LincRNA-p21 | Lnc2Cancer 3.0 |
9 | HULC | Lnc2Cancer 3.0 | 9 | KCNQ1OT1 | Lnc2Cancer 3.0 |
10 | IGF2-AS | PMID: 31183590 | 10 | NPTN-IT1 | Lnc2Cancer 3.0 |
11 | NEAT1 | Lnc2Cancer 3.0 | 11 | HULC | Lnc2Cancer 3.0 |
12 | PCAT29 | LncRNADisease v2.0 | 12 | TUG1 | Lnc2Cancer 3.0 |
13 | AIR | Lnc2Cancer 3.0 | 13 | MIAT | Lnc2Cancer 3.0 |
14 | GAS5 | Lnc2Cancer 3.0 | 14 | DRAIC | Lnc2Cancer 3.0 |
15 | TUG1 | Lnc2Cancer 3.0 | 15 | SRA1 | unconfirmed |