ProtPlat: an efficient pre-training platform for protein classification based on FastText

BMC Bioinformatics

Table 7 Performance comparison for protein subcellular location prediction

Model	Animals		Fungi		Plants
Model	ACC	F1	ACC	F1	ACC	F1
Euk-mPLoc	0.61	0.54	0.6	0.56	0.46	0.37
WoLF PSORT	0.7	0.67	0.5	0.51	0.57	0.46
LOCTree	0.62	0.58	0.47	0.43	0.7	0.58
BaCeILo	0.64	0.66	0.57	0.6	0.69	0.56
MultiLoc2-HighRes	0.68	0.71	0.53	0.58	0.62	0.54
MultiLoc2-LowRes	0.73	0.76	0.6	0.61	0.76	0.64
YLoc +	0.58	0.67	0.48	0.51	0.58	0.49
YLoc-HighRes	0.74	0.69	0.56	0.51	0.58	0.54
YLoc-LowRes	0.79	0.75	0.56	0.61	0.71	0.58
ProtPlat	0.66	0.66	0.71	0.71	0.72	0.72

ISSN: 1471-2105