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Table 1 Data structure of the TCR \(\beta\) chain’s CDR3 region

From: TCR-L: an analysis tool for evaluating the association between the T-cell receptor repertoire and clinical phenotypes

Subj . ID

Nucleotide sequence

Amino acid seq.

Abundance

V segment

\(\cdots\)

1

TGTGCCAGCAGCTTAGGTCGGGGCAAAGCTTTCTTT

CASSLGRGKAFF

1

TRBV7-9, \(\dots\), TRBV11-3

\(\cdots\)

1

TGTGCCAGCAGTTGGTTAATTGGCTACACCTTC

CASSWLIGYTF

1

TRBV6-4, \(\dots\), TRBV6-1

\(\cdots\)

1

TGTGCCAGCAGCTTAGGACGGGCTGAAGCTTTCTTT

CASSLGRAEAFF

9

TRBV7-9, \(\dots\), TRBV11-3

\(\cdots\)

1

TGTGCCAGCAGCTTGGGTCGATCACCCCTCCACTTT

CASSLGRSPLHF

4

TRBV11-2, \(\dots ,\) TRBV11-3

\(\cdots\)

1

TGTGCCAGCAGCCACGGACGAGCTGAAGCTTTCTTT

CASSHGRAEAFF

2

TRBV4-2

\(\cdots\)

2

TGTGCCAGCAGGGACAGGCAAGAGACCCAGTACTTC

CASRDRQETQYF

1

TRBV6-4, ..., TRBV6-1

\(\cdots\)

2

TGTACCTGGAAGGTATTTTTT

CTWKVFF

1

TRBV7-2

\(\cdots\)

3

TGCAGTGCTAGAGAGCGAGGCGAGCAGTACTTC

CSARERGEQYF

3

TRBV20-1

\(\cdots\)

4

TGTGCTGTGAGTCAAAACGGTGCCAGACTCATGTTT

CAVSQNGARLMF

1

TRAV8-4, TRAV8-6

\(\cdots\)

\(\vdots\)

\(\vdots\)

\(\vdots\)

\(\vdots\)

\(\vdots\)

\(\cdots\)