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Fig. 4 | BMC Bioinformatics

Fig. 4

From: Joint deep learning for batch effect removal and classification toward MALDI MS based metabolomics

Fig. 4

The architecture of the proposed deep learning framework for joint batch effect removal and classification. The source batch \({\mathbf{X}}_{1}\) and the target batch \({\mathbf{X}}_{2}\) are processed through the same calibrator \({\varvec{C}}\), such that both batches are compactly distributed in the latent space. The source batch supervises the training of the discriminator \({\varvec{D}}\), which then predicts the labels for the target batch in testing. Two reconstructors, \({\varvec{R}}_{1}\) and \({\varvec{R}}_{2}\), are used to ensure that the input data can be fully recovered from latent encoding

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