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Fig. 3 | BMC Bioinformatics

Fig. 3

From: J-SPACE: a Julia package for the simulation of spatial models of cancer evolution and of sequencing experiments

Fig. 3

Performances assessment. A The distribution of computational time in seconds to perform the simulation described in the text with respect to distinct sample size (over 50 simulation per configuration). B The distribution of computational time in seconds to generate the phylogenetic tree with respect to different sample size (over 50 simulation per configuration). C Distribution of computational time in seconds to generate the sequences for the phylogenetic trees above, with respect to distinct sample size (left) and genome length (right). In the top row, we present the results of the ISA-based model, in the bottom row we show the results of a finite-sites model (JC69) with indels (see the main text for further details)

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BMC Bioinformatics

ISSN: 1471-2105

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