Table 6 List of amino acids involved in the formation of hydrogen bonds between TLR4 (chain A) and the vaccine construct
From: In silico design of a multi-epitope vaccine against HPV16/18
TLR4 (chain A) | Vaccine | Distance (Å) |
|---|---|---|
Lys57 | Ser250 | 2.81 |
Lys57 | Ser250 | 2.52 |
Asn58 | Arg375 | 2.61 |
Glu79 | Ser250 | 2.73 |
Gln81 | Arg356 | 2.80 |
His103 | Ala251 | 2.92 |
Ser105 | Ile355 | 2.71 |
Thr106 | Pro353 | 2.74 |
Ser127 | Arg356 | 2.92 |
Gln129 | Arg356 | 2.80 |
Lys130 | Pro351 | 2.60 |
Lys150 | Asp181 | 2.56 |
Lys150 | Asp181 | 2.58 |
Lys153 | Thr345 | 2.66 |
Asn205 | His346 | 2.93 |
His229 | Ala347 | 2.98 |
His256 | Arg384 | 2.80 |
Glu287 | Arg348 | 2.84 |
Arg289 | Thr366 | 3.29 |
Glu336 | Thr366 | 2.88 |
Arg355 | Glu489 | 2.81 |
Arg355 | Ala485 | 2.70 |
Glu425 | Arg486 | 2.71 |
Glu425 | Arg448 | 2.96 |
Glu474 | Gln442 | 2.95 |
sGln523 | Asp495 | 2.84 |
Asn544 | Arg425 | 2.66 |
Asn544 | Pro429 | 2.82 |
Gln547 | Asn418 | 3.09 |
Gln547 | Gln420 | 2.86 |
Gln547 | Arg425 | 3.14 |
Gln547 | Tyr297 | 2.93 |
Gln547 | Asp495 | 2.81 |
Ser569 | Glu428 | 2.87 |
Leu601 | Tyr293 | 2.76 |