Table 1 Block-level identification rate over 500 replications for four true blocks under three graph structures
From: Super-taxon in human microbiome are identified to be associated with colorectal cancer
Method | Graph type | Block 1 | Block 2 | Block 3 | Block 4 | Average (SD) |
|---|---|---|---|---|---|---|
STB | Random | 0.8289 | 0.9918 | 1 | 0.8598 | 0.9201 (0.0885) |
STC | 0.9401 | 1 | 0.6736 | 1 | 0.9034 (0.1558) | |
ZIBR | 0.8223 | 0.8595 | 0.9814 | 0.9835 | 0.9117 (0.0831) | |
ANCOM-BC | 1 | 1 | 1 | 1 | 1 (0) | |
Hu et al. [14] | 0.0020 | 0.4633 | 0.1388 | 0 | 0.1510 (0.2181) | |
STB | Hub | 0.7478 | 0.7917 | 1 | 0.9364 | 0.8690 (0.1188) |
STC | 0.9670 | 1 | 1 | 1 | 0.9917 (0.0165) | |
ZIBR | 0.6865 | 0.7726 | 1 | 1 | 0.8648 (0.1601) | |
ANCOM-BC | 1 | 1 | 1 | 1 | 1 (0) | |
Hu et al. (2020) | 0.0082 | 0.2238 | 0.1458 | 0 | 0.0944 (0.1091) | |
STB | Cluster | 0.7868 | 1 | 1 | 1 | 0.9467 (0.1066) |
STC | 0.9510 | 1 | 0.9787 | 0.7975 | 0.9318 (0.0918) | |
ZIBR | 0.7361 | 0.7961 | 0.7682 | 0.9506 | 0.8128 (0.0951) | |
ANCOM-BC | 1 | 1 | 1 | 1 | 1 (0) | |
Hu et al. [14] | 0.0040 | 0.3300 | 0.1360 | 0 | 0.1175 (0.1551) |