Skip to main content

Table 2 The number of total samples including positive and negative samples in each dataset

From: DeepPN: a deep parallel neural network based on convolutional neural network and graph convolutional network for predicting RNA-protein binding sites

RBP

Samples

RBP

Samples

C17ORF85 PAR-CLIP

3754

EWSR1 PAR-CLIP

31649

CAPRIN1 PAR-CLIP

16041

ELAVL1 PAR-CLIP(A)

51249

C22ORF28 PAR-CLIP

18505

ELAVL1 PAR-CLIP(B)

18702

ALKBH5 PAR-CLIP

2410

FUS PAR-CLIP

66061

ELAVL1 HITS-CLIP

17031

PUM2 PAR-CLIP

17343

HNRNPC iCLIP

41266

IGF2BP1-3 PAR-CLIP

15377

SFRS1 HITS-CLIP

36633

MOV10 PAR-CLIP

26780

AGO2 HITS-CLIP

92346

ELAVL1 PAR-CLIP(C)

238888

TDP43 iCLIP

167110

ZC3H7B PAR-CLIP

40980

AGO1-4 PAR-CLIP

68212

PTB HITS-CLIP

88274

TIAL1 iCLIP

78984

TAF15 PAR-CLIP

13904

TIA1 iCLIP

34184

QKI PAR-CLIP

19418