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Table 6 Average F-score of using different strategy to screen the key mutant genes in PDGPCS for BLCA, BRCA, COAD and HNSC cancers

From: Prioritization of cancer driver gene with prize-collecting steiner tree by introducing an edge weighted strategy in the personalized gene interaction network

Strategy

BLCA

BRCA

COAD

HNSC

RWR + Hub genes selection

0.0343

0.0236

0.0348

0.0418

RWR

0.0266

0.013

0.0320

0.0215

Hub genes selection

0.0182

0.0111

0.0212

0.0125

Using all mutant genes

0.0124

0.0056

0.0080

0.0035

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BMC Bioinformatics

ISSN: 1471-2105

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