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Table 4 Results of the unweighted and weighted loss functions on Topdomain validation dataset

From: Multi-head attention-based U-Nets for predicting protein domain boundaries using 1D sequence features and 2D distance maps

Model

Average per target F1 score on multi-domain proteins

DistDom (unweighted)

0.470

DistDom (weighted)

0.402

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BMC Bioinformatics

ISSN: 1471-2105

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