Table 1 Detailed descriptions of tested genome datasets
From: CMIC: an efficient quality score compressor with random access functionality
Code | Datasets | Platforms | Organism | Bases (Mbp) | Read length | Size (Quality Score) |
|---|---|---|---|---|---|---|
1 | SRR1284073 | PacBio | Escherichia coli | 649.4 | (130,10,000) | 476,930,701 bytes |
2 | SRR327342 | Illumina | S.Cerevisiae | 2100 | 75 | 2,105,137,860 bytes |
3 | SRR870667 | Illumina | T.Cacao | 12,600 | 74 or 108 | 11,455,676,056 bytes |
4 | ERR091571 | Illumina | Homo sapiens | 42,700 | 100 | 43,133,335,476 bytes |
5 | SRR003187 | LS454 | Homo sapiens | 803 | (500,1000) | 798,985,944 bytes |
6 | SRR003177 | LS454 | Homo sapiens | 855 | (500,1000) | 850,464,554 bytes |
7 | SRR007215 | ABI Solid | Homo sapiens | 238.6 | 25 | 248,099,332 bytes |
8 | SRR010712 | ABI Solid | Homo sapiens | 431.6 | 35 | 443,972,736 bytes |
9 | SRR070253 | ABI Solid | Homo sapiens | 45,600 | 50 | 12,719,021,580 bytes |
10 | SRR801793 | Illumina | Legionella pneumophila | 1100 | 100 | 1,092,105,122 bytes |
11 | SRR14340293 | OXFORD NANOPORE | Puccinia graminis | 8900 | (1000,10,000) | 7,782,970,748 bytes |