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Fig. 2 | BMC Bioinformatics

Fig. 2

From: SMaSH: a scalable, general marker gene identification framework for single-cell RNA-sequencing

Fig. 2

Classifying broad cell types based on SMaSH-specific marker genes. A Confusion matrices for the top 30 marker genes per cell type in the lung broad cell classification data-set for scGeneFit, RankCorr, SMaSH using the network mode, and SMaSH using the ensemble mode (using XGBoost). B Cell misclassification and \(F_{1}\) scores for the two SMaSH modes against scGeneFit and RankCorr. C Benchmarking different SMaSH ensemble learning models across biological scRNA-seq data and related modalities

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