Table 2 Summary of simulation design (\(3 \times 3\)) with 100 randomization per design levels
From: SEMgsa: topology-based pathway enrichment analysis with structural equation models
Topology design | Gene regulation | Mean signal | ||
|---|---|---|---|---|
\(\pm\) 0.5 | \(\pm\) 0.6 | \(\pm\) 0.7 | ||
Betweenness | Up/down | 100 | 100 | 100 |
Community | Up/down | 100 | 100 | 100 |
Neighbourhood | Up/down | 100 | 100 | 100 |