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Table 4 Genes with ABCG2 direct interaction and the confidence of the regulation (w) determined by IntOMICS

From: Using empirical biological knowledge to infer regulatory networks from multi-omics data

 

5FU/FA

FOLFIRI

Low-RFS

High-RFS

Low-RFS

High-RFS

ELK1

High

Med

Low

Med

HRAS

Low

Med

Low

High

MAP3K1

High

Med

Low

NA

MAP2K1

Med

High

NA

Low

MAPK1/ERK2

Low

Low

Med

High

MAPK3/ERK1

High

Low

Low

NA

MRAS

Low

Low

High

Low

MYC

High

Med

Med

Med

MYCN

Low

Low

Low

High

RAF1

Med

NA

Low

High

RPS6KA3

High

NA

NA

Low

ABCG2 CNV

High

High

High

High

  1. Genes with the highest predictive potential are highlighted in bold. low \(w < 0.5\) quantile of all edge weights; med \(0.5 \ge w < 0.75\) quantile of all edge weights; high empirical frequency \(w \ge 0.75\) quantile of all edge weights; NA the edge was not identified