Skip to main content

Table 3 Statistics of the 1KGP input and output datasets

From: Genomic data integration and user-defined sample-set extraction for population variant analysis

 

Dataset

Region files

Metadata files

Size (.gz compressed)

Size (uncompressed)

Input

hg19

25

4

17 GB

796 GB

GRCh38

23

4

13 GB

752 GB

 

Dataset

Region files

Metadata files

Size

Execution time

Output

hg19

2535

2535

1.5 TB

217 h 7 min 40 s

GRCh38

2548

2548

1.1 TB

187 h 59 min 45 s