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Table 1 ION based identification of potential bio-markers

From: BRANEnet: embedding multilayer networks for omics data integration

Name

\(\uparrow /\downarrow\)

\({\mathcal {D}}\)

Function

References

BRANEnet modules

STI1

\(\uparrow\)

40

Hsp90 cochaperone

[56,57,58,59,60,61,62]

A

SSA4

\(\uparrow\)

39

Heat shock protein

[58, 60,61,62,63,64,65]

A

TFS1

\(\uparrow\)

46

Inhibitor of carboxy-peptidase Y, Ras GAP

[56,57,58, 60,61,62, 64]

A

YMR090W

\(\uparrow\)

50

Unknown function

[56, 58, 61]

A

SSE2

\(\uparrow\)

36

Hsp110 family member

[56,57,58, 60,61,62, 64, 65]

A

IDH2

\(\uparrow\)

37

Oxidative decarboxy-lation of isocitrate

[57, 58, 61, 62]

A

SSA1

\(\uparrow\)

40

ATPase

[57,58,59, 61, 62, 64]

A

STE2

\(\downarrow\)

36

Receptor for \(\alpha\)-factor pheromone

[64]

A

HSP104

\(\uparrow\)

33

Disaggregase

[56,57,58, 60,61,62, 64, 65]

A

STI1

\(\uparrow\)

41

Hsp90 cochaperone

[56,57,58,59,60,61,62]

A

MET6

\(\downarrow\)

31

Cobalamin-independent methionine synthase

[57, 61]

A

STR3

\(\uparrow\)

30

Peroxisomal cysta-thionine beta-lyase

[57, 61, 64]

A

RTC3

\(\uparrow\)

28

Unknown function

[56,57,58, 61, 64]

A

MSC1

\(\uparrow\)

27

Unknown function

[56,57,58, 60,61,62, 64, 65]

A

PNC1

\(\uparrow\)

27

Nicotinamidase acid

[57, 58, 61, 62, 64, 65]

A

GSP2

\(\uparrow\)

30

GTP binding protein

[57, 58]

A

GRE3

\(\uparrow\)

31

Aldose reductase

[57, 60,61,62, 64, 66]

A

YLR030W

\(\uparrow\)

31

Unknown function

B

SOL4

\(\uparrow\)

32

6-phospho-gluconolactonase

[56,57,58, 61, 64]

A

HSP12

\(\uparrow\)

28

Heat shock protein

[56,57,58, 60,61,62, 64, 65]

A

IDH1

\(\uparrow\)

25

Oxidative decarboxy-lation of isocitrate

[57, 58]

A

  1. The table provides the names, over- (\(\uparrow\)) or under- (\(\downarrow\)) expressed, node degree in ION (\({\mathcal {D}}\)), function, cross references, and BRANEnet module information comparison with external studies of potential bio-markers during heat stress response in yeast