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Table 3 Summary of the observed false discovery rates (FDR) and power from the permutation based simulations using the real RNA-Seq data from the case study

From: lmerSeq: an R package for analyzing transformed RNA-Seq data with linear mixed effects models

Method

FDR

Power

lmerSeq

0.051

0.912

DREAM

0.114

0.900

rmRNAseq

0.036

0.883

  1. Values presented are the means taken across the 10 simulated datasets when using a nominal FDR of 0.05 to identify differential expression
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BMC Bioinformatics

ISSN: 1471-2105

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