Profiling the BLAST bioinformatics application for load balancing on high-performance computing clusters

BMC Bioinformatics

Table 8 Different combinations of D/m and Q/n for D=523, 449, Q=73, 102, 023, and P=2, 048

m	n	\(\user2{m} \times \user2{n}\)	\(\user2{D}_{i} = \user2{D}/\user2{m}\)	\(\user2{Q}_{j} = \user2{Q}/\user2{n}\)
1	2,048	2,048	523,449	35,695
2	1,024	2,048	261,725	71,389
3	682	2,046	174,483	107,188
4	512	2,048	130,862	142,778
8	256	2,048	65,432	285,555
16	128	2,048	32,716	571,110
32	64	2,048	16,358	1,142,220

ISSN: 1471-2105