Fig. 5

The relative importance of RNA secondary structures for predicting the translational efficiency in zebrafish. A The boxplot of the feature importance of four feature sets. The feature importance is from the random forest model and the boxplot is generated based on the results from 100 times of random split shown in Fig. 1. B Line chart of the in vivo vs. in vitro feature importance. The X-axis is the bin index along the entire transcript (60 bins in total). Y-axis shows the feature importance of the icSHAPE reactivity in the corresponding bin. In vivo and in vitro transcripts are highlighted by red and blue curves, respectively. In vivo and in vitro CDS head are highlighted by purple and green curves, respectively. The CDS head is defined as the first 6 codons of the CDS region