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Table 2 The cross validation performances of all the three kernels at their best parameters

From: MP4: a machine learning based classification tool for prediction and functional annotation of pathogenic proteins from metagenomic and genomic datasets

Kernel

Accuracy (%)

Error

Dispersion

Cost

Gamma

Degree

Coefficient

Linear

69.03

0.30

0.01

1

–

–

–

Polynomial

80.2

0.18

0.02

1

0.1

2

2

RBF

78.6

0.2

0.02

6

0.001

–

–

  1. RBF Radial basis function
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BMC Bioinformatics

ISSN: 1471-2105

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