Pattern recognition of topologically associating domains using deep learning

BMC Bioinformatics

Table 2 SE-ResNet performance for three different experimental settings

Methods	TPR	TNR	Precision	Acc.	F1	AUC
Same species, cross cell types
SE-ResNet_Human.ES	0.922	0.832	0.846	0.877	0.882	0.877
SE-ResNet_Mouse.ES	0.853	0.763	0.783	0.808	0.817	0.808
Cross cell types
SE-ResNet_ES	0.907	0.841	0.851	0.874	0.878	0.874
Cross species
SE-ResNet_Human	0.876	0.864	0.862	0.870	0.869	0.870
SE-ResNet_Mouse	0.837	0.900	0.893	0.868	0.864	0.868

ISSN: 1471-2105