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Table 2 Number of Mapped Nanopore Reads in Subtelomere Regions

From: NPGREAT: assembly of human subtelomere regions with the use of ultralong nanopore reads and linked-reads

Region

Telom NP

SD length

Subtel NP

NPGREAT assembly size (bp)

9p

4

197,765

164

463,841

10p

17

81,456

156

476,942

18p

3

285,485

187

620,639

19q

30

23,299

84

326,420

20p

12

101,050

161

372,980

22q

20

70,840

91

509,481

  1. Telom NP (TTAGGG)n -containing nanopore read spanning subtelomeric segmental duplication region, SD Length Size of segmental Duplication region adjacent to the telomere. Subtel NP nanopore reads selected using distal-most 1-copy probes (100 K 1-copy)
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BMC Bioinformatics

ISSN: 1471-2105

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