Table 3 Summary of BS locations for 14 TFs on 498 upstream gene regions in real application, using the pooling strategy
From: Detecting clusters of transcription factors based on a nonhomogeneous poisson process model
TF | No. of BS | Summary of BS locations\(^*\) | |||||
|---|---|---|---|---|---|---|---|
Min. | 1st Qu. | Median | Mean | 3rd Qu. | Max. | ||
Esrrb | 698 | 0.026 | 2.707 | 5.807 | 5.287 | 7.833 | 9.983 |
Nanog | 414 | 0.004 | 2.372 | 5.055 | 4.893 | 7.399 | 9.955 |
Oct4 | 367 | 0.030 | 2.744 | 6.490 | 5.407 | 7.859 | 9.969 |
Sox2 | 288 | 0.072 | 2.308 | 4.866 | 4.841 | 7.432 | 9.929 |
E2f1 | 1,286 | 0.002 | 3.628 | 6.692 | 5.813 | 8.025 | 9.951 |
Smad1 | 123 | 0.020 | 1.853 | 4.911 | 4.720 | 7.020 | 9.938 |
Tcfcp2l1 | 744 | 0.003 | 3.504 | 6.382 | 5.622 | 7.934 | 9.991 |
Zfx | 575 | 0.013 | 4.023 | 7.332 | 5.984 | 8.058 | 9.937 |
Klf4 | 610 | 0.034 | 3.615 | 7.188 | 5.919 | 7.940 | 9.850 |
cMyc | 370 | 0.011 | 5.700 | 7.659 | 6.557 | 8.158 | 9.962 |
nMyc | 567 | 0.044 | 4.595 | 7.569 | 6.288 | 8.027 | 9.993 |
Stat3 | 255 | 0.040 | 2.838 | 5.561 | 5.133 | 7.636 | 9.911 |
Nr5a2 | 36 | 0.680 | 1.964 | 4.752 | 4.425 | 6.820 | 8.820 |
Tcf3 | 248 | 0.014 | 2.459 | 4.744 | 4.942 | 7.070 | 9.911 |