Table 3 Comparison of medical visualization systems and dashboards. The implementation details on the database (“DBMS”), available interfaces (“Interface”) and the data (“Data”) are listed. The features interactivity (“Int”), flexibility (“Flex”), collaboration (“Coll”) and export(“Exp”) are assessed qualitatively
From: Graph4Med: a web application and a graph database for visualizing and analyzing medical databases
System | DBMS | Interface | Int | Flex | Coll | Exp | Data |
|---|---|---|---|---|---|---|---|
MyPal [22] | Unknown | Web, Mobile App | ✓ | ✗ | ✗ | ✓ | Patient data, demographics, treatment, patient-reported outcomes |
CovidGraph [23] | Neo4j | Web | ✓ | ✗ | ✗ | ✓ | Publications, patents, clinical trials, genes, transcripts, proteins, pathways, statistics, systems biology data |
OncoKB [24] | MySQL | Web, CLI | ✓ | ✗ | ✗ | ✓ | Cancer mutations, drugs with corresponding cancer type & targeted mutations |
BioGraph [16] | Neo4j | Web | ✓ | ✗ | ✗ | ✓ | Genes, proteins, miRNA-related data, pathways, functional annotations |
LinkedImm [12] | Neo4j | Web | ✓ | ✗ | ✗ | ✓ | Immunological data, genes, pathways, transcriptional profiling data |
Graph4Med | Neo4j | Web | ✓ | ✓ | ✓ | ✗ | Patient diagnostic, genomic analysis results (incl. karyotyping, RNASeq, arrayCGH) |