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Fig. 5 | BMC Bioinformatics

Fig. 5

From: scCapsNet-mask: an updated version of scCapsNet with extended applicability in functional analysis related to scRNA-seq data

Fig. 5

The scCapsNet-mask assigns cell types in the spatial transcriptomics of the hippocampus and identifies several doublets. A The spatial map of predicted cell types in the hippocampus generated by RCTD [24] (Left) and scCapsNet-mask (Right). Of 17 cell types, the 8 most commonly appear in the legend. B The locations with two relatively high prediction probabilities by scCapsNet-mask are marked as red triangles in the spatial map of the hippocampus.

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BMC Bioinformatics

ISSN: 1471-2105

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