Fig. 9

Tara Oceans reassemblies using eukrhythmic (Carradec et al. (2018) [22]). A Map showing the locations of reassembled Tara Oceans samples. Boxes over regions are expanded in Panels B and C. B Mediterranean Sea samples. Numbers indicate Tara Oceans stations. C Southern Ocean samples. As in Panel B, numbers indicate Tara Oceans stations. D between-assembler overlap of the reads assigned to coding sequences. The x-axis indicates the annotations assigned to each of the coding sequences, and the y-axis shows the between-sample sum of reads assigned to coding sequences for that category. E Fraction of coding sequences that did or did not have a match to the MATOU database. Shades of blue indicate coding sequences recovered only by this study. The top segment indicates coding sequences without functional or taxonomic annotations, following by the proportion of sequences with functional and taxonomic annotations (“ft”), the proportion with only functional annotations (“f”), and the proportion with only taxonomic annotations (“t”). The same is shown in shades of orange for the assembld coding sequences from this study that did have a significant match to the MATOU database. The y-axis shows the color-coded Tara Oceans sample. F: The fraction of TPM assigned to coding sequences with recovered taxonomic annotations. These are from the “Not in MATOU” “ft” and “t” bars in Panel E. Dinoflagellated dominate many of the Southern Ocean samples, particularly for those coding sequences which could not be taxonomically annotated