Fig. 1From: LuxHMM: DNA methylation analysis with genome segmentation via hidden Markov modelDiagram of emission and transition probabilities. The top-most row (C) indicates the cytosine position, the second row (X) denotes the hidden methylation states and the bottom row (Y) represents the observed differences in methylation levels between groups. A denotes the state transition probabilities and B the observation emission probabilitiesBack to article page