Table 4 Overlap ratios of predicted PPIs between different types of link predictors for datasets with 50% of the PPIs removed (Table S6 and S7 show the complete data)
From: Normalized L3-based link prediction in protein–protein interaction networks
Overlap ratio of predicted PPIs between types of link predictors | ||||
|---|---|---|---|---|
Dataset \overlap between | CN-based | L3-based | CN & L3-based | CRA & L3N’(\(f_{1}\)) |
BioGRID Yeast | 69% | 79 ± 10 % | 30 ± 6 % | 35% |
STRING Yeast | 89% | 92 ± 2 % | 72 ± 6 % | 74% |
MINT Yeast | 43% | 72 ± 8 % | 32 ± 2 % | 34% |
BioGRID Human | 64% | 69 ± 4 % | 38 ± 4 % | 37% |
STRING Human | 54% | 58 ± 4 % | 44 ± 3 % | 44% |
MINT Human | 37% | 71 ± 10 % | 4 ± 2 % | 5% |
HuRI | 64% | 79 ± 7 % | 24 ± 3 % | 23% |