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Fig. 3 | BMC Bioinformatics

Fig. 3

From: Shine: A novel strategy to extract specific, sensitive and well-conserved biomarkers from massive microbial genomic datasets

Fig. 3

Illustration of the submodule preferentially searching for multicopy regions. (1) for searching candidate multicopy regions, internal alignments were performed on the microbial target fragments; (2) for verifying and obtaining the multicopy regions, including by determining the positions of each candidate multicopy region on the microorganism target fragments, obtaining the numbers of other candidate multicopy regions covering the positions of each base of the to-be-verified candidate multicopy regions, and calculating the median values of the copy numbers of the to-be-verified candidate multicopy regions

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BMC Bioinformatics

ISSN: 1471-2105

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