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Fig. 3 | BMC Bioinformatics

Fig. 3

From: cnnLSV: detecting structural variants by encoding long-read alignment information and convolutional neural network

Fig. 3

False positives with the same features as true positives in NA19240 dataset. A INS detected by Sniffles (5-17,587,397-1713), PBSV (5-17,587,396-1666), SVIM (5-17,587,396-1668), and cuteSV (5-17,587,397-1758). B DEL detected by Sniffles (7-4,179,134-85), PBSV (7-4,179,136-88), SVIM (7-4,179,144-87), and cuteSV (7-4,179,146-88). C INV detected by Sniffles (17-5,886,159-266), PBSV (17-5,886,159-266), SVIM (17-5,886,159-266), and cuteSV (17-5,886,163-272). D DUP detected by SVIM (9-140,739,516-1424) and cuteSV (9-140,739,517-1422). The content chr-pos-svl in parentheses represents the chromosome, position, and the length of the SV

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BMC Bioinformatics

ISSN: 1471-2105

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