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Table 4 F1-score of Ensemble GNN models for different number of base classifiers for the IBD dataset

From: Automatic disease prediction from human gut metagenomic data using boosting GraphSAGE

Number of base classifiers

Boosting GraphSAGE

Bagging GraphSAGE

Boosting GCN

Bagging GCN

5

0.93

0.91

0.86

0.91

10

0.95

0.94

0.86

0.92

15

0.93

0.92

0.87

0.94

20

0.91

0.92

0.89

0.93

25

0.91

0.92

0.89

0.93

30

0.9

0.91

0.92

0.92

35

0.92

0.9

0.91

0.9

40

0.92

0.9

0.9

0.9

  1. The bold font indicates highest results